Avantikalal's workspace
Runs
8
State
Notes
User
Tags
Created
Runtime
Sweep
data_params.tasks.name
data_params.train_bin_size
data_params.train_chroms
data_params.train_end
data_params.train_genome
data_params.train_label_len
data_params.train_max_pair_shift
data_params.train_max_seq_shift
data_params.train_n_alleles
data_params.train_n_augmented
data_params.train_n_seqs
data_params.train_n_tasks
data_params.train_padded_label_len
data_params.train_padded_seq_len
data_params.train_predict
data_params.train_rc
data_params.train_seq_len
data_params.val_bin_size
data_params.val_chroms
data_params.val_end
data_params.val_genome
data_params.val_label_len
data_params.val_max_pair_shift
data_params.val_max_seq_shift
data_params.val_n_alleles
data_params.val_n_augmented
data_params.val_n_seqs
data_params.val_n_tasks
data_params.val_padded_label_len
data_params.val_padded_seq_len
data_params.val_predict
data_params.val_rc
data_params.val_seq_len
model_params.crop_len
model_params.model_type
model_params.n_tasks
model_params.n_transformers
train_params.batch_size
train_params.class_weights
train_params.devices
train_params.logger
train_params.lr
train_params.max_epochs
train_params.num_workers
Finished
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avantikalal
5h 16m 46s
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EnformerPretrainedModel
16
1
512
[1.007176399230957,5.430635929107666,12.622308731079102,1.017770290374756,1.0143404006958008,4.821778774261475,1.077121019363403,2.9666566848754883,1.0206438302993774,1.0360476970672607,10.86656379699707,1.0241259336471558,1.3642692565917969,2.172910213470459,1.0186580419540403,8.760602951049805]
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wandb
0.0001
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16
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avantikalal
4m 59s
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gokceneraslan
3m 32s
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gokceneraslan
53s
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avantikalal
4h 49m 33s
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EnformerPretrainedModel
16
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512
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wandb
0.0002
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Finished
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avantikalal
19h 2m 31s
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["Acet","BivProm","DNase","EnhA","EnhWk","GapArtf","HET","PromF","Quies","ReprPC","TSS","Tx","TxEnh","TxEx","TxWk","znf"]
1
["chr12","chr6","chr20","chr11","chr3","chr5","chr1","chr17","chr18","chr8","chr15","chr10","chr2","chr4","chr16","chr14","chr9","chr21","chr19","chr22"]
both
hg38
1024
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3
1
1
2353772
16
1024
1030
false
true
1024
1
["chr7"]
both
hg38
1024
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1
146030
16
1024
1024
false
false
1024
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EnformerPretrainedModel
16
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512
[0.01854327493563345,0.09609507760682316,0.22494146896542108,0.01854327493563345,0.01854327493563345,0.09006136561969855,0.01854327493563345,0.05242419041161115,0.01854327493563345,0.01854327493563345,0.18997699917663977,0.01854327493563345,0.02433947829736887,0.03805059986956213,0.01854327493563345,0.13576462056780772]
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0.0002
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Finished
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avantikalal
5h 12m 29s
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EnformerPretrainedModel
16
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256
[0.026960126941103335,0.11177035338959136,0.14475105247198186,0.026960126941103335,0.026960126941103335,0.10475240681160716,0.026960126941103335,0.06097575895035189,0.026960126941103335,0.026960126941103335,0.14475105247198186,0.026960126941103335,0.028309796488702212,0.04425751141497514,0.026960126941103335,0.14475105247198186]
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0.0001
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16
Finished
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avantikalal
2m 55s
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1-8
of 8